miRBase entry: bta-mir-6122

Stem-loop bta-mir-6122


Accession
MI0021140
Description
Bos taurus bta-mir-6122 precursor miRNA


Sequence

40 reads, 6 reads per million, 14 experiments
gcaguuaccagUCAGUUGUACUUUAUCCAGUGCuaACUAUAUGAUGUAAACUGAACuauugg
.......((((((((((.(((.((((..(((....)))..)))).)))))))))....))))

Structure
gcaguua    ----      G   U    CC   G 
       ccag    UCAGUU UAC UUAU  AGU C
       ||||    |||||| ||| ||||  |||  
       gguu    AGUCAA AUG AGUA  UCA u
-------    auCA      -   U    UA   a 


Annotation confidence Not enough data
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Genome context
chr11: 43660500-43660561 [+]

Database links

Mature bta-miR-6122-5p

Accession MIMAT0024594
Description Bos taurus bta-miR-6122-5p mature miRNA
Sequence 12 - UCAGUUGUACUUUAUCCAGUGC - 33
Evidence experimental
Illumina [1]

Mature bta-miR-6122-3p

Accession MIMAT0024595
Description Bos taurus bta-miR-6122-3p mature miRNA
Sequence 36 - ACUAUAUGAUGUAAACUGAAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111