Stem-loop lus-MIR319b

Accession

MI0021150

Description

Linum usitatissimum lus-MIR319b precursor miRNA

Gene family

MIPF0001104; MIR319

Literature search

3 open access papers mention lus-MIR319b
(22 sentences)

Sequence

gcucugugaagaagaaaugugcagaaaugagggcuccuuucagccuaaaaacuacagguuuucucagacaagauccuguuucuuUUGGACUGAAGGGAGCUCCCaguucuucaguuucuuucaucugc
((...(((((..((((((.((.((((.((.(((((((((((((.((((((...(((((...(((......))).)))))...)))))).))))))))))))).)).)))).)))))))))))))..))

Structure

  ucu     ga      g  c    a  a             c      acu     uuu   ca 
gc   gugaa  agaaau ug agaa ug gggcuccuuucag cuaaaa   acagg   ucu  g
||   |||||  |||||| || |||| || ||||||||||||| ||||||   |||||   |||   
cg   uacuu  ucuuug ac ucuu aC CUCGAGGGAAGUC GGUUuu   ugucc   aga  a
  -uc     --      -  u    g  C             A      cuu     --u   ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR319b

• Accession: MIMAT0027130
• Description: Linum usitatissimum lus-miR319b mature miRNA
• Sequence: 85 - UUGGACUGAAGGGAGCUCCC - 104
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161