Stem-loop lus-MIR167b

Accession

MI0021151

Description

Linum usitatissimum lus-MIR167b precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

3 open access papers mention lus-MIR167b
(5 sentences)

Sequence

uauaugcccaaguguuggggugagaggcUGAAGCUGCCAGCAUGAUCUUggucaacaaaagccaucuuucagcuucaaguuuugaugguugagucugaagaucaggucaucuugcagcuucaaucacucacuaaccaacaccaaacuuaua
...........(((((((((((((.((.(((((((((.((.(((((((.((((..((..(((((((....((((...))))..))))))).....))..))))))))))))).))))))))).)).))))))..)))))))..........

Structure

uauaugcccaa       --      a  c         C  C       U    aa  ---aa       uuuc    u 
           guguugg  ggugag gg UGAAGCUGC AG AUGAUCU gguc  ca     agccauc    agcu  
           |||||||  |||||| || ||||||||| || ||||||| ||||  ||     |||||||    |||| c
           cacaacc  ucacuc cu acuucgacg uc uacugga cuag  gu     uugguag    uuga  
-auauucaaac       aa      a  a         u  -       -    aa  cugag       --uu    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167b

• Accession: MIMAT0027131
• Description: Linum usitatissimum lus-miR167b mature miRNA
• Sequence: 29 - UGAAGCUGCCAGCAUGAUCUU - 49
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161