Stem-loop lus-MIR395a

Accession

MI0021152

Description

Linum usitatissimum lus-MIR395a precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

1 open access papers mention lus-MIR395a
(7 sentences)

Sequence

aucaguugucuccuugaguucuccucaucacuucauuggguuaacuuguugauuuauguaugaugaucauaagcaagcauccuaCUGAAGUGUUUGGGGGAACUCugggcggcaucugau
(((((.((((.(((.((((((((((...(((((((.((((....((((((((((..........)))))...)))))...)))).)))))))...)))))))))).))).)))).)))))

Structure

     u    u   u          cau       u    uuaa     ---     uaug 
aucag uguc ccu gaguucuccu   cacuuca uggg    cuugu   ugauu    u
||||| |||| ||| ||||||||||   ||||||| ||||    |||||   |||||     
uaguc acgg ggg CUCAAGGGGG   GUGAAGU aucc    gaacg   acuag    a
     u    c   u          UUU       C    -uac     aau     uagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR395a

• Accession: MIMAT0027132
• Description: Linum usitatissimum lus-miR395a mature miRNA
• Sequence: 85 - CUGAAGUGUUUGGGGGAACUC - 105
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161