miRBase entry: lus-MIR395b

Stem-loop lus-MIR395b


Accession
MI0021153
Description
Linum usitatissimum lus-MIR395b precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
1 open access papers mention lus-MIR395b
(7 sentences)

Sequence

accaggucuccccuggaguuccccugaacgcuucacugagaggcucugucauucuuaCUGAAGUGUUUGGGGGAACUCuggcuguggcuuggu
((((((((.(..(((((((((((((((((((((((.((((((((...)))..))))).)))))))))))))))))))))))..).))))))))

Structure
        u cc                       c     --   u 
accagguc c  cuggaguuccccugaacgcuuca ugaga  ggc  
|||||||| |  ||||||||||||||||||||||| |||||  ||| c
ugguucgg g  gguCUCAAGGGGGUUUGUGAAGU auucu  cug  
        u uc                       C     ua   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lus-miR395b

Accession MIMAT0027133
Description Linum usitatissimum lus-miR395b mature miRNA
Sequence 58 - CUGAAGUGUUUGGGGGAACUC - 78
Evidence not_experimental

References

  1. PubMed ID: 23291876
    Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
    "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
    "Planta (2013) 237:1149-1161