Stem-loop lus-MIR156b

Accession

MI0021181

Description

Linum usitatissimum lus-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

3 open access papers mention lus-MIR156b
(10 sentences)

Sequence

uuagaggagaugaagguuuuggguugagagcccuuuugggauauguugUUGACAGAAGAUAGAGAGCACagaagaugaugggauacaauugauaguaucucacuuccuuugugcucucuauguuucugucaucaccuguucgggccucuuccauccuuccucuuuuucga
...(((((((.(((((...((((..(((.((((.....(((((.((.(.(((((((((((((((((((((((.((.(.((((((((........))))))))).)).)))))))))))))).))))))))).))).)))))))))))).)))).))))).)))))))...

Structure

uua       u     uuu    uu   a    uuuug     u  u U         -              a  u a        aau 
   gaggaga gaagg   uggg  gag gccc     ggaua gu g UGACAGAAG AUAGAGAGCACaga ga g ugggauac   u
   ||||||| |||||   ||||  ||| ||||     ||||| || | ||||||||| |||||||||||||| || | ||||||||    
   uuuuucu cuucc   accu  cuc cggg     cuugu ca c acugucuuu uaucucucguguuu cu c acucuaug   g
agc       c     --u    -u   -    -----     c  - u         g              c  u -        aua 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR156b

• Accession: MIMAT0027161
• Description: Linum usitatissimum lus-miR156b mature miRNA
• Sequence: 49 - UUGACAGAAGAUAGAGAGCAC - 69
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161