miRBase entry: lus-MIR156f

Stem-loop lus-MIR156f


Accession
MI0021206
Description
Linum usitatissimum lus-MIR156f precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
3 open access papers mention lus-MIR156f
(7 sentences)

Sequence

ggguugagagcucuuuugggggauguugUUGACAGAAGAUAGAGAGCACagaugaugggauacaauugauaguauacauaucucacuuccuuugugcucucuaugcuucugucaucaucuuuucgagcggccuccucgaucc
((((((((.(((.(((.((((((((....(((((((((((((((((((((((.(((((((((................)))))))..)).)))))))))))))).))))))))).)))))))).))).)))...))))))))

Structure
        --a   c   u        uugU         -              u  --       caauuga 
ggguugag   gcu uuu gggggaug    UGACAGAAG AUAGAGAGCACaga ga  ugggaua       u
||||||||   ||| ||| ||||||||    ||||||||| |||||||||||||| ||  |||||||        
ccuagcuc   cgg gag uuuucuac    acugucuuc uaucucucguguuu cu  acucuau       a
        cuc   c   c        ---u         g              c  uc       acauaug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lus-miR156f

Accession MIMAT0027186
Description Linum usitatissimum lus-miR156f mature miRNA
Sequence 29 - UUGACAGAAGAUAGAGAGCAC - 49
Evidence not_experimental

References

  1. PubMed ID: 23291876
    Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
    "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
    "Planta (2013) 237:1149-1161