Stem-loop lus-MIR390d

Accession

MI0021223

Description

Linum usitatissimum lus-MIR390d precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

1 open access papers mention lus-MIR390d
(22 sentences)

Sequence

aguaucagaagaaucuguaAAGCUCAGGAGGGAUAGCGCCauacaauucgauccugaccuugcacggauucgaucacuuuggcgcuauccauccugaguuucaucgcuucuucuugcu
((((..(((((((.(.((.((((((((((.(((((((((((......(((((((((......)).))).))))......))))))))))).)))))))))).)).).)))))))))))

Structure

    uc       u u  a          G           uacaau    -   -  ac 
agua  agaagaa c gu AAGCUCAGGA GGAUAGCGCCa      ucga ucc ug  c
||||  ||||||| | || |||||||||| |||||||||||      |||| ||| ||   
ucgu  ucuucuu g ua uuugaguccu ccuaucgcggu      agcu agg ac  u
    --       c c  c          a           uucacu    u   c  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR390d

• Accession: MIMAT0027203
• Description: Linum usitatissimum lus-miR390d mature miRNA
• Sequence: 20 - AAGCUCAGGAGGGAUAGCGCC - 40
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161