Stem-loop lus-MIR172i

Accession

MI0021250

Description

Linum usitatissimum lus-MIR172i precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

1 open access papers mention lus-MIR172i
(1 sentences)

Sequence

agccacugcuugcuacuggagcaucaucaagauucacaaccccacccacggacuaccaaaaagcuuucaucuuuucaucaugacguuguggguauugGGAAUCUUGAUGAUGCUGCAGcggcaaucacugccu
((.((.((.(((((.(((.((((((((((((((((.(((.(((((..(((........(((((.......)))))........))).)))))..))).)))))))))))))))).))).))))).)).)).))

Structure

  c  c  c     a   g                a   -c     cc   gacuacca     cu 
ag ca ug uugcu cug agcaucaucaagauuc caa  cccac  acg        aaaag  u
|| || || ||||| ||| |||||||||||||||| |||  |||||  |||        |||||  u
uc gu ac aacgg GAC UCGUAGUAGUUCUAAG guu  gggug  ugc        uuuuc  c
  c  c  u     c   G                G   au     -u   aguacuac     ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR172i

• Accession: MIMAT0027230
• Description: Linum usitatissimum lus-miR172i mature miRNA
• Sequence: 98 - GGAAUCUUGAUGAUGCUGCAG - 118
• Evidence: experimental ; qRT-PCR [1]

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161