Stem-loop ptr-mir-6127

Accession

MI0021261

Description

Pan troglodytes ptr-mir-6127 precursor miRNA

Gene family

MIPF0001405; mir-6127

Sequence

ccuaacucacagugugacccugggcaaguuaucucaucuuucugaaccccacuuucuccaucuaccaagaUGAGGGAGUGGGUGGGAGGugggaaggcugccccaaaug
......((((...))))....(((((.(((.(((((((((((.....(((((((((((.((((....))))))))))))))).))))))))))).))))))))......

Structure

ccuaacucacagugugacccu     a   a           ugaac           c    a 
                     gggca guu ucucaucuuuc     cccacuuucuc aucu c
                     ||||| ||| |||||||||||     ||||||||||| ||||  
                     cccgu cgg aggguGGAGGG     GGGUGAGGGAG Uaga c
---------------guaaac     -   a           ----U           -    a 

Annotation confidence Not enough data

Genome context

chr1: 21761627-21761735 [-]

Mature ptr-miR-6127

• Accession: MIMAT0024600
• Description: Pan troglodytes ptr-miR-6127 mature miRNA
• Sequence: 71 - UGAGGGAGUGGGUGGGAGG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564