miRBase entry: ptr-mir-6129

Stem-loop ptr-mir-6129


Accession
MI0021264
Description
Pan troglodytes ptr-mir-6129 precursor miRNA
Gene family
MIPF0001423; mir-6129


Sequence

guuccuucuaaggauuccagUGAGGGAGUUGGGUGUAUAggaaggaaaucuuauuguccaaguuucccuuugaaaccucuuagaauggaauaaaacugcccaaaucaua
(((((((((((((........((((((((((((...((((((......))))))..)))))..))))))).......)))))))).)))))..................

Structure
------------------     -        auuccagU       --     UGU      ag 
                  guucc uucuaagg        GAGGGAG  UUGGG   AUAgga  g
                  ||||| ||||||||        |||||||  |||||   ||||||   
                  uaagg aagauucu        uucccuu  aaccu   uauucu  a
auacuaaacccgucaaaa     u        -ccaaagu       ug     -gu      aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 8584029-8584137 [+]

Database links

Mature ptr-miR-6129

Accession MIMAT0024603
Description Pan troglodytes ptr-miR-6129 mature miRNA
Sequence 21 - UGAGGGAGUUGGGUGUAUA - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564