miRBase entry: ptr-mir-6131

Stem-loop ptr-mir-6131


Accession
MI0021266
Description
Pan troglodytes ptr-mir-6131 precursor miRNA
Gene family
MIPF0001412; mir-6131


Sequence

ucccgcauucccucugcuuuggucagguggugcccuccuuccauggguagagccagagaugguggguucuGGCUGGUCGGAUGGGAGUGgacagagacccgggguccua
.....(((((((((((..(((((((((....((((.((.((..(((......)))..)).)).))))))))))))).)))).)))))))...((.((((...)))))).

Structure
---------------ucccg       -    cu         uggu    u  u  ca   gu 
                    cauuccc ucug  uuggucagg    gccc cc uc  ugg  a
                    ||||||| ||||  |||||||||    |||| || ||  |||   
                    GUGAGGG AGGC  GGUCGGucu    uggg gg ag  acc  g
auccuggggcccagagacag       U    -U         ----    u  u  ag   ga 


Annotation confidence Not enough data
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Genome context
chr5: 10743768-10743876 [+]

Database links

Mature ptr-miR-6131

Accession MIMAT0024605
Description Pan troglodytes ptr-miR-6131 mature miRNA
Sequence 71 - GGCUGGUCGGAUGGGAGUG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564