miRBase entry: ptr-mir-6132

Stem-loop ptr-mir-6132


Accession
MI0021267
Description
Pan troglodytes ptr-mir-6132 precursor miRNA
Gene family
MIPF0001438; mir-6132


Sequence

ugcuauugucuuacugcuacAGCAGGGCUGGGGAUUGCAguauccgcuguugcugcugcugccaguccugccccugcugcuaccuaguccagccucacugcaucccaga
(((...((.......((((((((((((...((((((((((((.(.((....)).).))))).)))))))..)))))))).....)))).......))..))).......

Structure
-------   uau  ucuuacu    -----        CUG       -     u c  u 
       ugc   ug       gcua     cAGCAGGG   GGGAUUG CAgua c gc g
       |||   ||       ||||     ||||||||   ||||||| ||||| | ||  
       acg   ac       ugau     gucguccc   uccugac gucgu g cg u
agacccu   -uc  uccgacc    ccauc        -cg       c     c u  u 


Annotation confidence Not enough data
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Genome context
chr7: 121509994-121510102 [+]

Database links

Mature ptr-miR-6132

Accession MIMAT0024606
Description Pan troglodytes ptr-miR-6132 mature miRNA
Sequence 21 - AGCAGGGCUGGGGAUUGCA - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564