miRBase entry: ptr-mir-6134

Stem-loop ptr-mir-6134


Accession
MI0021270
Description
Pan troglodytes ptr-mir-6134 precursor miRNA
Gene family
MIPF0001445; mir-6134


Sequence

ugggccuugaugucaguagggcucaguagggaacugacccucuauuuccaccugcauaaaugaagcugaaUGAGGUGGUAGGAUGUAGAgcuaguugacacucugcuuu
.((((((((.......))))))))((((((((((((...((((((..((((((.(((............)))))))))......)))))).)))))....)))))))..

Structure
ugggccuugaugucaguagggcuc       ----     acc      ----uu      g   aaaug 
                        aguaggg    aacug   cucuau      ccaccu cau     a
                        |||||||    |||||   ||||||      |||||| |||      
                        ucgucuc    uugau   gAGAUG      GGUGGA GUa     a
----------------------uu       acag     --c      UAGGAU      -   agucg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 28687284-28687392 [-]

Database links

Mature ptr-miR-6134

Accession MIMAT0024609
Description Pan troglodytes ptr-miR-6134 mature miRNA
Sequence 71 - UGAGGUGGUAGGAUGUAGA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564