Stem-loop pgi-MIR6135b

Accession

MI0021294

Description

Panax ginseng pgi-MIR6135b precursor miRNA

Gene family

MIPF0001644; MIR6135

Literature search

1 open access papers mention pgi-MIR6135b
(4 sentences)

Sequence

guuagcaugaaguuauuuuuuUGGUAAGUUGGUCAAUUGGCcaauagaaugcugacacacauacagucucgucugcguguuaauauucuauuagccaauugacuaacuuacuccaaaauaaacuuuaugcuaac
((((((((((((((..((((..(((((((((((((((((((.(((((((((.((((((.((.((......)).)).)))))).))))))))).)))))))))))))))))))..))))..))))))))))))))

Structure

              au    uU                   c         c      a  u  ag 
guuagcaugaaguu  uuuu  GGUAAGUUGGUCAAUUGGC aauagaaug ugacac ca ac  u
||||||||||||||  ||||  ||||||||||||||||||| ||||||||| |||||| || ||   
caaucguauuucaa  aaaa  ucauucaaucaguuaaccg uuaucuuau auugug gu ug  c
              au    cc                   a         a      c  c  cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6135b

• Accession: MIMAT0027242
• Description: Panax ginseng pgi-miR6135b mature miRNA
• Sequence: 22 - UGGUAAGUUGGUCAAUUGGC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385