Stem-loop pgi-MIR6135g

Accession

MI0021299

Description

Panax ginseng pgi-MIR6135g precursor miRNA

Gene family

MIPF0001644; MIR6135

Literature search

1 open access papers mention pgi-MIR6135g
(3 sentences)

Sequence

guuuauuuuuGAGUAAGUUGGUCAAUUGGCaaauagaauauugacacgcaggcgaaguucuguguauuagcauucuauugaccaauugacuaauuuacucaaaaauaaac
(((((((((((((((((((((((((((((..((((((((.((((.(((((((......))))))).)))).))))))))..)))))))))))))))))))))))))))))

Structure

                             Ca        a    c       cg 
guuuauuuuuGAGUAAGUUGGUCAAUUGG  aauagaau uuga acgcagg  a
|||||||||||||||||||||||||||||  |||||||| |||| |||||||   
caaauaaaaacucauuuaaucaguuaacc  uuaucuua gauu ugugucu  a
                             ag        c    a       ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6135g

• Accession: MIMAT0027248
• Description: Panax ginseng pgi-miR6135g mature miRNA
• Sequence: 11 - GAGUAAGUUGGUCAAUUGGC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385