Stem-loop pgi-MIR6135h

Accession

MI0021300

Description

Panax ginseng pgi-MIR6135h precursor miRNA

Gene family

MIPF0001644; MIR6135

Literature search

1 open access papers mention pgi-MIR6135h
(3 sentences)

Sequence

guauuaaguucauuuuuACGUAAGUUGGUCAAUUGGCcaauagagugcugacacgcaagcgagacucuauguauaucaauauucuauugaucaauugaccaauuuaucaaaaaauaaacuucaugc
((((.(((((.((((((..(((((((((((((((((.((((((((((.(((...(((((.(...).)).)))...))).)))))))))).)))))))))))))))))..)))))).))))).))))

Structure

    u     c      AC                 C          c   cac   -  c a 
guau aaguu auuuuu  GUAAGUUGGUCAAUUGG caauagagug uga   gca ag g  
|||| ||||| ||||||  ||||||||||||||||| |||||||||| |||   ||| || | g
cgua uucaa uaaaaa  uauuuaaccaguuaacu guuaucuuau acu   ugu uc c  
    c     a      ac                 a          a   aua   a  u a 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6135h

• Accession: MIMAT0027249
• Description: Panax ginseng pgi-miR6135h mature miRNA
• Sequence: 18 - ACGUAAGUUGGUCAAUUGGC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385