Stem-loop pgi-MIR6136b

Accession

MI0021305

Description

Panax ginseng pgi-MIR6136b precursor miRNA

Gene family

MIPF0001741; MIR6136

Literature search

1 open access papers mention pgi-MIR6136b
(14 sentences)

Sequence

cuuaucuuacucacccgugcuaaccucccuuuaggcgacguuucggUCAUACAACCGUCGUCUAUACuuuuagucgacggacaacauauagcgucgcuaaaaguauaaaugaugguuguaugaccgaaaccgucgucuaaagagaugagcacgggugaguaaaauaag
(((((.(((((((((((((((....((.(((((((((((((((((((((((((((((((((.(((((((((((.(((((............)))))))))))))))).))))))))))))))))))))).)))))))))))).))..))))))))))))))).)))))

Structure

     c               aacc  c            -                     C           u     gacaa 
cuuau uuacucacccgugcu    uc cuuuaggcgacg uuucggUCAUACAACCGUCGU UAUACuuuuag cgacg     c
||||| |||||||||||||||    || |||||||||||| ||||||||||||||||||||| ||||||||||| |||||      
gaaua aaugagugggcacga    ag gaaaucugcugc aaagccaguauguugguagua auaugaaaauc gcugc     a
     a               --gu  a            c                     a           -     gauau 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6136b

• Accession: MIMAT0027255
• Description: Panax ginseng pgi-miR6136b mature miRNA
• Sequence: 47 - UCAUACAACCGUCGUCUAUAC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385