Stem-loop pgi-MIR6143a

Accession

MI0021317

Description

Panax ginseng pgi-MIR6143a precursor miRNA

Gene family

MIPF0001685; MIR6143

Literature search

1 open access papers mention pgi-MIR6143a
(4 sentences)

Sequence

uuuauuucauguccaauacaguguugacauacagucgagaggaugaucucuccgccugcguaucAGUACUGUAUUGGGCAUGAAGugaa
.((((((((((((((((((((((((((.((.(((.((((((......)))).)).))).)).)))))))))))))))))))))))))).

Structure

u                          c  a   u  -    ga 
 uuauuucauguccaauacaguguuga au cag cg agag  u
 |||||||||||||||||||||||||| || ||| || ||||   
 aguGAAGUACGGGUUAUGUCAUGAcu ug guc gc ucuc  g
a                          a  c   c  c    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6143a

• Accession: MIMAT0027267
• Description: Panax ginseng pgi-miR6143a mature miRNA
• Sequence: 65 - AGUACUGUAUUGGGCAUGAAG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385