miRBase entry: nta-MIR156d

Stem-loop nta-MIR156d


Accession
MI0021322
Description
Nicotiana tabacum nta-MIR156d precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
7 open access papers mention nta-MIR156d
(22 sentences)

Sequence

aaaagggaggUGACAGAAGAGAGUGAGCACagaugguguuuucuugcauugauauauguauaugcuugaagcuaugcgugcucacucucuaucugucacccccaccacuc
....(((.((((((((((((((((((((((..(((((...(((..((((..((....))..))))..))))))))..))))))))))))).)))))))))))).......

Structure
---aaaa   a         -             ag     guu   uu    ug  a 
       ggg ggUGACAGA AGAGAGUGAGCAC  auggu   uuc  gcau  au u
       ||| ||||||||| |||||||||||||  |||||   |||  ||||  ||  
       ccc ccacugucu ucucucacucgug  uaucg   aag  cgua  ug a
cucacca   -         a             cg     ---   uu    ua  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR156d

Accession MIMAT0024632
Description Nicotiana tabacum nta-miR156d mature miRNA
Sequence 11 - UGACAGAAGAGAGUGAGCAC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28