Stem-loop nta-MIR156e

Accession

MI0021323

Description

Nicotiana tabacum nta-MIR156e precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

7 open access papers mention nta-MIR156e
(22 sentences)

Sequence

uaaagggaggUGACAGAAGAGAGUGAGCACacaugguauuuucuugcauaugauaugcuugaagcuaugcgugcucacugcucuaucugucaccccccaccacu
....(((.((((((((((((((((((((((.((((((...(((..(((((...)))))..))))))))).))))))))).)))).))))))))).)))......

Structure

--uaaa   a         -    -         a      auu   uu     u 
      ggg ggUGACAGA AGAG AGUGAGCAC cauggu   uuc  gcaua  
      ||| ||||||||| |||| ||||||||| ||||||   |||  ||||| g
      ccc ccacugucu ucuc ucacucgug guaucg   aag  cguau  
ucacca   c         a    g         c      ---   uu     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR156e

• Accession: MIMAT0024633
• Description: Nicotiana tabacum nta-miR156e mature miRNA
• Sequence: 11 - UGACAGAAGAGAGUGAGCAC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28