miRBase entry: nta-MIR156g

Stem-loop nta-MIR156g


Accession
MI0021325
Description
Nicotiana tabacum nta-MIR156g precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
7 open access papers mention nta-MIR156g
(24 sentences)

Sequence

gugagauuguUGACAGAAGAUAGAGAGCACagaugaugaucaugcugcuaaaucugggauuggagagggcacugaaucaauuaaacugcaaaaaaaaaaagcaucucaauucauuugugcucucuaugcuuccgucaucaccuucaccg
(((((..((.((((.(((((((((((((((((((((((((((.(.((((...(((......)))...))))))).)))).......(((...........))).......))))))))))))))))).)))).)))).))..)))))..

Structure
--     au  u    A    -                 -------------------------------    -  u c    aaa   gg 
  gugag  ug UGAC GAAG AUAGAGAGCACagauga                               ugau ca g ugcu   ucu  g
  |||||  || |||| |||| |||||||||||||||||                               |||| || | ||||   |||   
  cacuu  ac acug cuuc uaucucucguguuuacu                               acua gu c acgg   agg  a
gc     cc  u    c    g                 uaacucuacgaaaaaaaaaaacgucaaauua    a  - -    gag   uu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature nta-miR156g

Accession MIMAT0024635
Description Nicotiana tabacum nta-miR156g mature miRNA
Sequence 11 - UGACAGAAGAUAGAGAGCAC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28