miRBase entry: nta-MIR156i

Stem-loop nta-MIR156i


Accession
MI0021327
Description
Nicotiana tabacum nta-MIR156i precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
7 open access papers mention nta-MIR156i
(22 sentences)

Sequence

ugauaauuguUGACAGAAGAUAGAGAGCACugaugaugauaugcuaauuaaauuugugcagcaaaagcaucucaauucauuugugcucucuaugcuucugucaucaccuucagcca
(((....((.((((((((((((((((((((.((((((((.(((((.......(((((...)))))))))).)))..))))).))))))))))).))))))))).))...)))....

Structure
----   uaau  u         -           u     --   u     aauuaaa     g 
    uga    ug UGACAGAAG AUAGAGAGCAC gauga  uga augcu       uuugu  
    |||    || ||||||||| ||||||||||| |||||  ||| |||||       ||||| c
    acu    ac acugucuuc uaucucucgug uuacu  acu uacga       aaacg  
accg   -ucc  u         g           u     ua   c     -------     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR156i

Accession MIMAT0024637
Description Nicotiana tabacum nta-miR156i mature miRNA
Sequence 11 - UGACAGAAGAUAGAGAGCAC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28