Stem-loop nta-MIR160a

Accession

MI0021330

Description

Nicotiana tabacum nta-MIR160a precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

5 open access papers mention nta-MIR160a
(12 sentences)

Sequence

aauaugcauaUGCCUGGCUCCCUGUAUGCCAuuugcagagcucaucggaauaccguuggguccccgugaauggcguaugaggagccaagcauaucccggauau
.((((.(((((((.(((((((.((((((((((((((...(((((.(((....))).)))))....)))))))))))))).))))))).))))))...).))))

Structure

a    g ---      C       C              -aga     u   a 
 auau c   auaUGC UGGCUCC UGUAUGCCAuuugc    gcuca cgg a
 |||| |   |||||| ||||||| ||||||||||||||    ||||| |||  
 uaua g   uauacg accgagg guaugcgguaagug    ugggu gcc u
-    g ccc      a       a              cccc     u   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR160a

• Accession: MIMAT0024640
• Description: Nicotiana tabacum nta-miR160a mature miRNA
• Sequence: 11 - UGCCUGGCUCCCUGUAUGCCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28