Stem-loop nta-MIR160b

Accession

MI0021331

Description

Nicotiana tabacum nta-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

4 open access papers mention nta-MIR160b
(10 sentences)

Sequence

gaucugcauaUGCCUGGCUCCCUGUAUGCCAuuugcagagcucaucggaauaccguuggguccccgugaauggcguaugaggagccaagcauauccccgauau
.(((...((((((.(((((((.((((((((((((((...(((((.(((....))).)))))....)))))))))))))).))))))).))))))....)))..

Structure

-g   -ugc      C       C              -aga     u   a 
  auc    auaUGC UGGCUCC UGUAUGCCAuuugc    gcuca cgg a
  |||    |||||| ||||||| ||||||||||||||    ||||| |||  
  uag    uauacg accgagg guaugcgguaagug    ugggu gcc u
ua   cccc      a       a              cccc     u   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR160b

• Accession: MIMAT0024641
• Description: Nicotiana tabacum nta-miR160b mature miRNA
• Sequence: 11 - UGCCUGGCUCCCUGUAUGCCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28