Stem-loop nta-MIR162b

Accession

MI0021335

Description

Nicotiana tabacum nta-MIR162b precursor miRNA

Gene family

MIPF0000127; MIR162_1

Literature search

1 open access papers mention nta-MIR162b
(7 sentences)

Sequence

uugaggacacuggaggcagcgguucaucgaucuguucccugaacgcaacagcgcugggaaucggUCGAUAAACCUCUGCAUCCAGcgcuuaaacc
(((((....(((((.((((.((((.(((((((.((((((....(((....)))..)))))).))))))).)))).)))).)))))..)))))...

Structure

---     gaca     g    c    c       u      ugaa   a 
   uugag    cugga gcag gguu aucgauc guuccc    cgc a
   |||||    ||||| |||| |||| ||||||| ||||||    |||  
   aauuc    GACCU CGUC CCAA UAGCUgg uaaggg    gcg c
cca     --gc     A    U    A       c      --uc   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR162b

• Accession: MIMAT0024645
• Description: Nicotiana tabacum nta-miR162b mature miRNA
• Sequence: 65 - UCGAUAAACCUCUGCAUCCAG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28