miRBase entry: nta-MIR166c

Stem-loop nta-MIR166c


Accession
MI0021341
Description
Nicotiana tabacum nta-MIR166c precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
3 open access papers mention nta-MIR166c
(7 sentences)

Sequence

ucuguugaggggaaugcugucugguucgaaaccauucaccaaaguaugaucaagaguuugauuauuugaaugauuUCGGACCAGGCUUCAUUCCCCccaacucua
...((((.((((((((..(((((((((((((.((((((.......((((((((....)))))))).)))))).)))))))))))))..)))))))).))))....

Structure
-ucu    a        cu             c      ccaaagu        g 
    guug ggggaaug  gucugguucgaaa cauuca       augaucaa a
    |||| ||||||||  ||||||||||||| ||||||       ||||||||  
    caac CCCCUUAC  CGGACCAGGCUuu guaagu       uauuaguu g
aucu    c        UU             a      ------u        u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR166c

Accession MIMAT0024651
Description Nicotiana tabacum nta-miR166c mature miRNA
Sequence 76 - UCGGACCAGGCUUCAUUCCCC - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28