miRBase entry: nta-MIR166g

Stem-loop nta-MIR166g


Accession
MI0021345
Description
Nicotiana tabacum nta-MIR166g precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
3 open access papers mention nta-MIR166g
(5 sentences)

Sequence

uuuguuaaggagaauguugucugguucgugaccaaucuguaaacaguaauuagcuaacugucaacauucaucacuugaaugaucUCGGACCAGGCUUCAUUCCCCucaacucaa
...(((.(((.(((((..((((((((((.((...........(((((.........)))))...((((((.....)))))).)).))))))))))..))))).))).)))....

Structure
-uuu   a   a     uu          u  ccaaucuguaaacaguaauuagcuaacugucaa      u 
    guu agg gaaug  gucugguucg ga                                 cauuca c
    ||| ||| |||||  |||||||||| ||                                 |||||| a
    caa uCC CUUAC  CGGACCAGGC cu                                 guaagu c
aacu   c   C     UU          U  --------------------------------a      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR166g

Accession MIMAT0024655
Description Nicotiana tabacum nta-miR166g mature miRNA
Sequence 85 - UCGGACCAGGCUUCAUUCCCC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28