miRBase entry: nta-MIR169l

Stem-loop nta-MIR169l


Accession
MI0021368
Description
Nicotiana tabacum nta-MIR169l precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
4 open access papers mention nta-MIR169l
(15 sentences)

Sequence

gaguagauugCAGCCAAGGAUGACUUGCCGAgauguuguagcuaaugcaacgacuuaucggcaggucguccuuggcuacauuuuacucu
(((((((.((.((((((((((((((((((((...(((((.((....)).)))))...)))))))))))))))))))).)).))))))).

Structure
-       u  C                    gau     a  u 
 gaguaga ug AGCCAAGGAUGACUUGCCGA   guugu gc a
 ||||||| || ||||||||||||||||||||   ||||| ||  
 cucauuu ac ucgguuccugcuggacggcu   cagca cg a
u       u  a                    auu     a  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR169l

Accession MIMAT0024678
Description Nicotiana tabacum nta-miR169l mature miRNA
Sequence 11 - CAGCCAAGGAUGACUUGCCGA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28