Stem-loop nta-MIR394

Accession

MI0021394

Description

Nicotiana tabacum nta-MIR394 precursor miRNA

Gene family

MIPF0000100; MIR394

Literature search

1 open access papers mention nta-MIR394
(1 sentences)

Sequence

uagagccauuUUGGCAUUCUGUCCACCUCCauugcuagcuccauaucuuucaaugaggagggggccagagugccaaacuagcucugca
((((((...(((((((((((((((.(((((((((..((........))..))))..)))))))).))))))))))))...))))))..

Structure

--      cau            -   A     --    cu  cuc 
  uagagc   uUUGGCAUUCUG UCC CCUCC  auug  ag   c
  ||||||   |||||||||||| ||| |||||  ||||  ||    
  gucucg   aaaccgugagac ggg ggagg  uaac  uc   a
ac      auc            c   -     ag    uu  uau 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR394

• Accession: MIMAT0024704
• Description: Nicotiana tabacum nta-miR394 mature miRNA
• Sequence: 11 - UUGGCAUUCUGUCCACCUCC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28