Stem-loop nta-MIR399c

Accession

MI0021405

Description

Nicotiana tabacum nta-MIR399c precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

4 open access papers mention nta-MIR399c
(11 sentences)

Sequence

aauagugauagggcuacucucuauuggcaugcacuuauauauguauagugacucaacuugauaucauaacauauucagcugacaCGCCAAAGGAGAGCUGCCCUGuuacugucuc
.(((((((((((((..((((((.(((((.((((((...((((((...((((.(((...)))..)))).))))))..)).)).)).))))).))))))..)))))))))))))...

Structure

--a             ua      a     a  -  -  uau      aua    -c   a 
   auagugauagggc  cucucu uuggc ug ca cu   auaugu   guga  uca  
   |||||||||||||  |||||| ||||| || || ||   ||||||   ||||  ||| c
   ugucauuGUCCCG  GAGAGG AACCG ac gu ga   uauaca   uacu  agu  
cuc             UC      A     C  a  c  -cu      --a    au   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR399c

• Accession: MIMAT0024715
• Description: Nicotiana tabacum nta-miR399c mature miRNA
• Sequence: 85 - CGCCAAAGGAGAGCUGCCCUG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28