miRBase entry: nta-MIR827

Stem-loop nta-MIR827


Accession
MI0021415
Description
Nicotiana tabacum nta-MIR827 precursor miRNA
Gene family
MIPF0000726; MIR827

Literature search
1 open access papers mention nta-MIR827
(1 sentences)

Sequence

uaugaauuuguuuguugauggucaucuauucaucauucugcauaguuuuugcacccauuauccuauggUUAGAUGAACAUCAACAAACAucuucaucac
.(((((..((((((((((((.(((((((..........((((.......)))).((((......)))).))))))).))))))))))))..)))))...

Structure
--u     uu            g       ------uucaucauuc    ua 
   augaa  uguuuguugaug ucaucua                ugca  g
   |||||  |||||||||||| |||||||                ||||  u
   uacuu  ACAAACAACUAC AGUAGAU                acgu  u
cac     cu            A       Ugguauccuauuaccc    uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR827

Accession MIMAT0024725
Description Nicotiana tabacum nta-miR827 mature miRNA
Sequence 69 - UUAGAUGAACAUCAACAAACA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28