Stem-loop nta-MIR6025c

Accession

MI0021420

Description

Nicotiana tabacum nta-MIR6025c precursor miRNA

Gene family

MIPF0001375; MIR6025

Sequence

gucaaaccuggauguaaucucaauuguuagcaugccuaaauugggcaaaacaucuccgcccagaaaauauauucugauaugagauucagaauauauuuguuggguguuuugccuaguccggcauaccaUCAAUUGAGAUGACAUCUAGUuuugacgauc
((((((.((((((((.((((((((((...(.(((((...((((((((((((......((((((.(((((((((((((........))))))))))))).))))))))))))))))))..))))).)...)))))))))).)))))))).))))))....

Structure

----      c        a          uua c     uaa            aucucc      a             uau 
    gucaaa cuggaugu aucucaauug   g augcc   auugggcaaaac      gcccag aaauauauucuga   g
    |||||| |||||||| ||||||||||   | |||||   ||||||||||||      |||||| |||||||||||||    
    caguuu GAUCUACA UAGAGUUAAC   c uacgg   ugauccguuuug      uggguu uuuauauaagacu   a
cuag      U        G          Uac a     -cc            ------      g             uag 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6025c

• Accession: MIMAT0024730
• Description: Nicotiana tabacum nta-miR6025c mature miRNA
• Sequence: 129 - UCAAUUGAGAUGACAUCUAGU - 149
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28