miRBase entry: nta-MIR6146a

Stem-loop nta-MIR6146a


Accession
MI0021424
Description
Nicotiana tabacum nta-MIR6146a precursor miRNA
Gene family
MIPF0001562; MIR6146


Sequence

cucaacgggcUUUGUCCAAUGAAACACUUAUCggacaucaaggguucagaucaguguucacuggacaaagaucguuaccgu
...((((..(((((((((.((((.((((.(((((((.......)))).))).)))))))).)))))))))..)))).....

Structure
--cuc    gg         A    A    U   -    au 
     aacg  cUUUGUCCA UGAA CACU AUC ggac  c
     ||||  ||||||||| |||| |||| ||| ||||  a
     uugc  gaaacaggu acuu guga uag cuug  a
ugcca    ua         c    -    c   a    gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6146a

Accession MIMAT0024734
Description Nicotiana tabacum nta-miR6146a mature miRNA
Sequence 11 - UUUGUCCAAUGAAACACUUAUC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28