miRBase entry: nta-MIR6152b

Stem-loop nta-MIR6152b


Accession
MI0021442
Description
Nicotiana tabacum nta-MIR6152b precursor miRNA
Gene family
MIPF0001607; MIR6152


Sequence

cuggacagauUAUUGUAUUCGACUGUAUUCACGGcaugaaauaggggauuauacuguuuuuaaaauggaaagugaaucaauuaacauaauagacuccuaauaua
..(((....(((((((.((.((.((.((((((..((((((((((.........)))))))....)))....)))))))).)))).)))))))..))).......

Structure
-----cu   caga       A  C  C  U      --GG   ----       ggg 
       gga    uUAUUGU UU GA UG AUUCAC    cau    gaaauag   a
       |||    ||||||| || || || ||||||    |||    |||||||   u
       ccu    gauaaua aa uu ac uaagug    gua    uuuuguc   u
auauaau   --ca       c  -  a  -      aaag   aaau       aua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6152b

Accession MIMAT0024752
Description Nicotiana tabacum nta-miR6152b mature miRNA
Sequence 11 - UAUUGUAUUCGACUGUAUUCACGG - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28