miRBase entry: nta-MIR5303a

Stem-loop nta-MIR5303a


Accession
MI0021451
Description
Nicotiana tabacum nta-MIR5303a precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
1 open access papers mention nta-MIR5303a
(1 sentences)

Sequence

ggacucuccgAAAAUGUGGCCGGAUACGUGUcggauccuccaaaaguagugcauuuuugaaggauccgacacgggugcggcuacauuuuggagaguccgcgcaa
(((((((((.((((((((((((.((.(((((((((((((.(((((((.....))))))).))))))))))))).)).)))))))))))))))))))))......

Structure
------         g            G  A             c       a 
      ggacucucc AAAAUGUGGCCG AU CGUGUcggauccu caaaagu g
      ||||||||| |||||||||||| || ||||||||||||| ||||||| u
      ccugagagg uuuuacaucggc ug gcacagccuagga guuuuua g
aacgcg         -            g  g             a       c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR5303a

Accession MIMAT0024761
Description Nicotiana tabacum nta-miR5303a mature miRNA
Sequence 11 - AAAAUGUGGCCGGAUACGUGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28