Stem-loop nta-MIR6158a

Accession

MI0021456

Description

Nicotiana tabacum nta-MIR6158a precursor miRNA

Gene family

MIPF0001461; MIR6158

Sequence

caagaugcccAAGUUCGAUUUGUACGAAGGGCauggcgauccuauggcacaucuacggggcuuuuguagcaaaaugaggggagcagggggaaaugaugagcuacugauagcuuacuuuggccagaguuugagcgggucggcacuggagugguauacaa
....((((((.((((((((((((.((((.....((((.(((((...((...(((.((..(((.....)))....)))))...))...)))).....(((((((....)))))))...).))))...)))).))))))))).)))...).)))))....

Structure

caag     - --A   -         A    GGGCa    g --------------------------    aug  aca   a  --gg   u 
    augcc c   AGU UCGAUUUGU CGAA     uggc a                          uccu   gc   ucu cg    gcu u
    ||||| |   ||| ||||||||| ||||     |||| |                          ||||   ||   ||| ||    ||| u
    uaugg g   uca ggcugggcg guuu     accg u                          aggg   cg   gga gu    cga g
aaca     u agg   c         a    --gag    g uucauucgauagucaucgaguaguaa    gga  agg   -  aaaa   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6158a

• Accession: MIMAT0024766
• Description: Nicotiana tabacum nta-miR6158a mature miRNA
• Sequence: 11 - AAGUUCGAUUUGUACGAAGGGC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28