Stem-loop nta-MIR6158c

Accession

MI0021458

Description

Nicotiana tabacum nta-MIR6158c precursor miRNA

Gene family

MIPF0001461; MIR6158

Sequence

caaaaugcccAAGUUCGAUUUGUACGAAGGGCauggcgauccuauggcgcaucuacgggguuuuuguagcaaaaugaggggagcaggggggaaagaugagcuacugauagcuuacuuuggccaaaauuugagcgggucggcacuggagugguauacaa
....((((((.((((((((((((.((((.....((((...(((...((...(((.((..(((.....)))....)))))...))...))).((((.(((((((....))))))))))).))))...)))).))))))))).)))...).)))))....

Structure

caaa     - --A   -         A    GGGCa    --------------------------gau   aug  gca   a  --gg   u 
    augcc c   AGU UCGAUUUGU CGAA     uggc                             ccu   gc   ucu cg    guu u
    ||||| |   ||| ||||||||| ||||     ||||                             |||   ||   ||| ||    ||| u
    uaugg g   uca ggcugggcg guuu     accg                             ggg   cg   gga gu    cga g
aaca     u agg   c         a    --aaa    guuucauucgauagucaucgaguagaaag   gga  agg   -  aaaa   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6158c

• Accession: MIMAT0024768
• Description: Nicotiana tabacum nta-miR6158c mature miRNA
• Sequence: 11 - AAGUUCGAUUUGUACGAAGGGC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28