Stem-loop nta-MIR6161b

Accession

MI0021465

Description

Nicotiana tabacum nta-MIR6161b precursor miRNA

Gene family

MIPF0001465; MIR6161

Sequence

auuuugcugcaacagagacugguccagcauaauauauuggaguucggugcaccuguguaugaacuccagcauauuaugcuggaccgguauacuuugcugacuccaguauaauauacuagagacuggagagucuagcauaauauauuggaguucggugcaccuguguaugaacuccagcauauuauGCUGGACCGGUAUACUUUGCUGACuccaguauau
....(((((((.(((((((((((((((((((((((.((((((((((.(((((..(((((((((((((((.(((((((((((((((((((.....))))).(((((((..............))))))).)))))))))))))).))))))))).))))))..))))))))))))))).))))))))))))))))))...))))).))....)))))...

Structure

auuu     ----  a     ---                  a          g     cu      -         c              cgguauacuuugcuga       auaaua 
    ugcug    ca cagag   acugguccagcauaauau uuggaguucg ugcac  guguau gaacuccag auauuaugcuggac                cuccagu      u
    |||||    || |||||   |||||||||||||||||| |||||||||| |||||  |||||| ||||||||| ||||||||||||||                |||||||       
    augac    GU GUUUC   UGGCCAGGUCGuauuaua gaccucaagu augug  cacgug cuugagguu uauaauacgaucug                gagguca      a
-uau     cuCA  C     AUA                  c          -     uc      g         a              ---------------a       gagauc 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6161b

• Accession: MIMAT0024775
• Description: Nicotiana tabacum nta-miR6161b mature miRNA
• Sequence: 186 - GCUGGACCGGUAUACUUUGCUGAC - 209
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28