Stem-loop nta-MIR6164a

Accession

MI0021470

Description

Nicotiana tabacum nta-MIR6164a precursor miRNA

Gene family

MIPF0001598; MIR6164

Sequence

auuauaacucuccguuucaauuuaugugaacuuauuuccuuuuuaguccgugccaaaaaaaaugauaucuuuccuuauuuggaaacaauuuaacuuuaugcaacgauuuauagucacacaaaauauaugugccucauuuuauaccacaaguucaaaaaucuucucucuuuuuuuaaacuucgugcccagucaaauagguUCACAUAAAUUGAAACGGAGGaguaggaauu
......(((((((((((((((((((((((((((((((.....................(((((((....(((((......)))))...................((((...)))).((((.......))))..)))))))....((((((((.(((((...........))))).))))).))).......))))))))))))))))))))))))))).)))).......

Structure

-auuaua    -                           ccuuuuuaguccgugccaaaaaaaaugauaucuuuccuuauuuggaaacaauuuaacuuuaugcaacgauuuauagucacacaaaauauaugugccucauuuuauac   -     c     ucuu 
       acuc uccguuucaauuuaugugaacuuauuu                                                                                                           cac aaguu aaaaa    c
       |||| |||||||||||||||||||||||||||                                                                                                           ||| ||||| |||||    u
       ugaG AGGCAAAGUUAAAUACACUuggauaaa                                                                                                           gug uucaa uuuuu    c
uuaagga    G                           ----------------------------------------------------------------------------------------------------cugaccc   c     a     uucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6164a

• Accession: MIMAT0024780
• Description: Nicotiana tabacum nta-miR6164a mature miRNA
• Sequence: 200 - UCACAUAAAUUGAAACGGAGG - 220
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28