Stem-loop nta-MIR6164b

Accession

MI0021471

Description

Nicotiana tabacum nta-MIR6164b precursor miRNA

Gene family

MIPF0001598; MIR6164

Sequence

uuuuuuauuacucccuccguuucaauuuaugugaaccuauuuccuuuuuaguccaugccaaaaagaaugaccucuuuccuuauuuggaaacaauuuaccuuuaugcaaugauuuauagccacacaaaauauaugugucucauuuuacaccacaaguucaaaaguauucucuuuucuuaaacuccgugcccagucaaauggguUCACAUAAAUUGAAACGGAGGgaguacaacau
........((((((((((((((((((((((((((((((((((.((((((.((....)).)))))).........(((((......)))))..............((.(((...))).)).(((((.......)))))............(((.((((.(((((......)))))....))))..))).......))))))))))))))))))))))))))))))))))......

Structure

uuuuuuau                                  ccuuuuuaguccaugccaaaaagaaugaccucuuuccuuauuuggaaacaauuuaccuuuaugcaaugauuuauagccacacaaaauauaugugucucauuuuacac   -a    ---c     ua 
        uacucccuccguuucaauuuaugugaaccuauuu                                                                                                           cac  aguu    aaaag  u
        ||||||||||||||||||||||||||||||||||                                                                                                           |||  ||||    |||||   
        augagGGAGGCAAAGUUAAAUACACUuggguaaa                                                                                                           gug  ucaa    uuuuc  u
--uacaac                                  ----------------------------------------------------------------------------------------------------cugaccc   cc    auuc     uc 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6164b

• Accession: MIMAT0024781
• Description: Nicotiana tabacum nta-miR6164b mature miRNA
• Sequence: 203 - UCACAUAAAUUGAAACGGAGG - 223
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28