Stem-loop hbr-MIR482a

Accession

MI0021477

Description

Hevea brasiliensis hbr-MIR482a precursor miRNA

Gene family

MIPF0000403; MIR482

Literature search

1 open access papers mention hbr-MIR482a
(1 sentences)

Sequence

gguuagaggaaguucauggAGAUGGGUGGCUGGGCAAGAAGaaaaagauguuuugucuaaucgugggucaucuucuugccuacuccacccauuccauccacuuccuugaacuu
((((.((((((((..((((((.(((((((.((((((((((((....(((.(..((......)).).))).))))))))))))..)))))))))))))..)))))))).)))).

Structure

-    a        uc      A       -C            aaaa   g uu  uc 
 gguu gaggaagu  auggAG UGGGUGG  UGGGCAAGAAGa    gau u  ug  u
 |||| ||||||||  |||||| |||||||  ||||||||||||    ||| |  ||   
 ucaa uuccuuca  uaccuu acccacc  auccguucuucu    cug g  gc  a
u    g        cc      -       uc            ---a   g -u  ua 

Annotation confidence Not enough data

Genome context

KB617227.1: 192559-192671 [-]

Mature hbr-miR482a

• Accession: MIMAT0024787
• Description: Hevea brasiliensis hbr-miR482a mature miRNA
• Sequence: 20 - AGAUGGGUGGCUGGGCAAGAAG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445