Stem-loop hbr-MIR6170

Accession

MI0021479

Description

Hevea brasiliensis hbr-MIR6170 precursor miRNA

Sequence

ucucucacucccugguccugguccugguccuuuuccuuucuccuuuucuuucuguuucuuggaaaacaaagagucucucCAAGAAACAGAAGAGAGGGAUucaaggaaagggagaagucugucuuguagagauuagagu
.......((((((((.((.......)).))..((((((..((((((((((.((((((((((((..((.....))...))))))))))))))))))))))...)))))))))))).(.((((((((...)))).)))).)

Structure

------------------ucucuca      gguccugguccugguccuu      -uc          u            -aa  a 
                         cucccu                   uuccuu   uccuuuucuu cuguuucuugga   ac a
                         ||||||                   ||||||   |||||||||| ||||||||||||   || a
                         gaggga                   aaggaa   AGGGAGAGAA GACAAAGAACcu   ug g
ugagauuagagauguucugucugaa      -------------------      cuU          -            cuc  a 

Annotation confidence Not enough data

Genome context

AJJZ010428717.1: 484-622 [-]

Mature hbr-miR6170

• Accession: MIMAT0024789
• Description: Hevea brasiliensis hbr-miR6170 mature miRNA
• Sequence: 80 - CAAGAAACAGAAGAGAGGGAU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445