Stem-loop hbr-MIR396a

Accession

MI0021481

Description

Hevea brasiliensis hbr-MIR396a precursor miRNA

Gene family

MIPF0000047; MIR396

Literature search

3 open access papers mention hbr-MIR396a
(18 sentences)

Sequence

CACAGCUUUCUUGAACUUUCUuguacuuauucuuuugaucucuauagauugaauagguagcaccuuggaagcucaagaaagcugug
((((((((((((((.(((((..((((((((((....(((((....))))))))))))))....)..))))).))))))))))))))

Structure

              A     Uu ----         uuuu     c 
CACAGCUUUCUUGA CUUUC  g    uacuuauuc    gaucu u
|||||||||||||| |||||  |    |||||||||    |||||  
gugucgaaagaacu gaagg  c    auggauaag    uuaga a
              c     uu cacg         ----     u 

Annotation confidence Not enough data

Genome context

AJJZ010461223.1: 797-882 [-]

Mature hbr-miR396a

• Accession: MIMAT0024791
• Description: Hevea brasiliensis hbr-miR396a mature miRNA
• Sequence: 1 - CACAGCUUUCUUGAACUUUCU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445