Stem-loop hbr-MIR6174

Accession

MI0021485

Description

Hevea brasiliensis hbr-MIR6174 precursor miRNA

Sequence

uaagaaagcaaggaugauagcuuggcauaacaacuacaaaaauugaaucaacuagagugagugaguagauuauuuucagggauuucaagucuuucaacauacugcuggaugaccaauggaAUGCUAAGCUGUCAGACUUUGggcuggccauauuggggcc
......((((((..((((((((((((((..((..........(((..(((.((((((((.(((((.(((((................)))))))).)).)))).)))).))).)))))..))))))))))))))..)))...)))((((.......))))

Structure

---------uaagaa   ---   ga              aa  acuacaaaaa   aa   a    -    a  -   u     auuuuca 
               agc   aag  ugauagcuuggcau  ca          uug  uca cuag agug gu gag agauu       g
               |||   |||  ||||||||||||||  ||          |||  ||| |||| |||| || ||| |||||        
               ucg   UUC  ACUGUCGAAUCGUA  gu          aac  agu gguc ucau ca cuu ucuga       g
ccgggguuauaccgg   gGU   AG              ag  ----------   -c   a    g    a  a   -     acuuuag 

Annotation confidence Not enough data

Genome context

Unknown

Mature hbr-miR6174

• Accession: MIMAT0024795
• Description: Hevea brasiliensis hbr-miR6174 mature miRNA
• Sequence: 121 - AUGCUAAGCUGUCAGACUUUG - 141
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445