miRBase entry: hvu-MIR6178

Stem-loop hvu-MIR6178


Accession
MI0021491
Description
Hordeum vulgare hvu-MIR6178 precursor miRNA


Sequence

cuuucaaagaCACGGAACUGGGCGGUUGCACUgaagacauuaauugucauacaucgugcccuucgagaaguugaccccacguuucgugaagagcuuau
..........((((((((((((.((..(((((((.((((.....)))).).))..)))))).((((....)))).)))).))))))))..........

Structure
cuuucaaaga        -    -------------C  UU    --  - a    u 
          CACGGAAC UGGG              GG  GCAC  Ug a gaca u
          |||||||| ||||              ||  ||||  || | |||| a
          gugcuuug accc              cc  cgug  ac u cugu a
uauucgagaa        c    caguugaagagcuu  --    cu  a a    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6178

Accession MIMAT0024801
Description Hordeum vulgare hvu-miR6178 mature miRNA
Sequence 11 - CACGGAACUGGGCGGUUGCACU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984