Stem-loop hvu-MIR5049c

Accession

MI0021493

Description

Hordeum vulgare hvu-MIR5049c precursor miRNA

Gene family

MIPF0001200; MIR5067

Literature search

2 open access papers mention hvu-MIR5049c
(4 sentences)

Sequence

guuucuacuuccccuguuccaaaauaaaugucucaaccuuguacuagcucuaguauaaaauuguacuaagccucuAGACAAUUAUUUUGGGACGGAGGaaguauuauu
.....(((((((.((((((((((((((.((((((((..((((((((....))))))))..)))............))))).)))))))))))))).))))))).....

Structure

guuuc       c              a     ------------   cc        g 
     uacuucc cuguuccaaaauaa ugucu            caa  uuguacua c
     ||||||| |||||||||||||| |||||            |||  ||||||||  
     augaaGG GGCAGGGUUUUAUU ACAGA            guu  aauaugau u
uuauu       A              A     ucuccgaaucau   aa        c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5049c

• Accession: MIMAT0024803
• Description: Hordeum vulgare hvu-miR5049c mature miRNA
• Sequence: 76 - AGACAAUUAUUUUGGGACGGAGG - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984