miRBase entry: hvu-MIR6186

Stem-loop hvu-MIR6186


Accession
MI0021500
Description
Hordeum vulgare hvu-MIR6186 precursor miRNA


Sequence

cucuucucuguucucucucggccucugccucuucuucucucucguccucugccucuucuugauuugcgguaaaacuagccugcacgcggucaacuggauauacaguuggugagccgagcugccaCGAGGAAGGCGCUGAGAGAGAggagagaaga
.((((((((.((((((((((((.(((.((((..(..(((.((((.((.(((..(((..((((((.((((((.........))).)))))))))..)))....)))..))))))..)))..)....)))).))).)))))))))))).))))))))

Structure
c        g            c   g    --uu uu   -u    u  -u   --cc   uc      u   -   aaa 
 ucuucucu uucucucucggc ucu ccuc    c  cuc  cucg cc  cug    ucu  uugauu gcg gua   c
 |||||||| |||||||||||| ||| ||||    |  |||  |||| ||  |||    |||  |||||| ||| |||   u
 agaagaga gAGAGAGAGUCG GGA GGAG    g  gag  gagu gg  gac    agg  aacugg cgc cgu   a
-        g            C   A    Cacc uc   cc    -  uu   auau   uc      -   a   ccg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6186

Accession MIMAT0024810
Description Hordeum vulgare hvu-miR6186 mature miRNA
Sequence 125 - CGAGGAAGGCGCUGAGAGAGA - 145
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984