Stem-loop hvu-MIR6199

Accession

MI0021515

Description

Hordeum vulgare hvu-MIR6199 precursor miRNA

Sequence

aagcuugcagCCACAGAAUUCUCACAGUGAUGGgccuccucuugccccgugucagucaaggccaugguggucaaagccauccuuucuuauggaucaacagcuucauccugugccaucaacugugacaaauucuguggucaguaggaua
...(((((.(((((((((((.((((((((((((........((((((((((((......)).))))).)).)))....((((........))))..((((.......)))).))))).)))))))..)))))))))))..)))))...

Structure

aag     -a           -C       -     ------------------------------gccuccuc   -  -     -  ag 
   cuugc  gCCACAGAAUU  UCACAGU GAUGG                                      uug cc ccgug uc  u
   |||||  |||||||||||  ||||||| |||||                                      ||| || ||||| ||   
   ggaug  uggugucuuaa  aguguca cuacc                                      aac gg gguac gg  c
aua     ac           ac       a     guguccuacuucgacaacuagguauucuuuccuaccga   u  u     c  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR6199

• Accession: MIMAT0024825
• Description: Hordeum vulgare hvu-miR6199 mature miRNA
• Sequence: 11 - CCACAGAAUUCUCACAGUGAUGG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984