miRBase entry: osa-MIR6245

Stem-loop osa-MIR6245


Accession
MI0021592
Description
Oryza sativa osa-MIR6245 precursor miRNA


Sequence

45 reads, 17 reads per million, 2 experiments
aguuuuuuuugauagagccgacaccuauacuuauauuauaggugucaguucuagagaaaaaacuggcaccaaaaaaacgacaccaaggugaaccgacaccuauaauauaAGUAUAGGUGUCGGCUCUAUUaaaaaaaccg
...(((((((((((((((((((((((((((((((((((((((((((.(((((((........))))((((................))))))).)))))))))))))))))))))))))))))))))))))))))))...

Structure
agu                                           a   ------------------------    aga 
   uuuuuuugauagagccgacaccuauacuuauauuauagguguc guu                        cuag   a
   ||||||||||||||||||||||||||||||||||||||||||| |||                        ||||    
   aaaaaaaUUAUCUCGGCUGUGGAUAUGAauauaauauccacag caa                        gguc   a
gcc                                           c   guggaaccacagcaaaaaaaccac    aaa 


Annotation confidence Not enough data
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Genome context
Chr2: 16647775-16647914 [+]

Database links

Mature osa-miR6245

Accession MIMAT0024865
Description Oryza sativa osa-miR6245 mature miRNA
Sequence 110 - AGUAUAGGUGUCGGCUCUAUU - 130
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658